Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801019.1_cds_XP_016472563.1_6445
CDS Infomation

[gene=LOC107794579] [db_xref=GeneID:107794579] [protein=protein DJ-1 homolog B-like] [protein_id=XP_016472563.1] [location=complement(join(10643..10840,11134..11274,11347..11547,12044..12124,12862..13044,13141..13290,15252..15452,15532..15696))] [gbkey=CDS]
Sequence

ATGGCAGCACCAGTAATGCGCCACCTCACTCCCGTCCCTTCTTCCTTTATAAAACTCCAA
ATACTTCCCCAAAGTCGCTCTTTTTTCACTCTCTCCACTCCTCGCAAGAAGAAACGATTC
TCCCTCGTAACTTCATTTTCAGTCATGGCTTCTGCTACTAAGAAGGTATTGGTTCCGATT
GCGAACGGGACCGAGCCGATTGAGGCTATTGTGCCGATAGATATTTTGCGGAGAGCTGGT
GCGGAGGTTACTGTTGCCTCAGTTGAGAAGCAGCTTCAGATTGAAGGAGTGCACGGAATT
AAGATCGTTGCCGATGCTCTAATTTCTGATTGTGCGGATACTGAATTCGACCTTATCTCA
CTTCCGGGAGGGATTCCTGGTGCAACCAACCTAAGGAATTGCAAGACTTTGGAAAGCATA
GTAAAAAAGCAAGCTGTAAATGGACGGTTTTATGCTGCAATATGCGCTGCTCCTGCTGTA
GCACTTGGATCATGGGGGCTTCTGAAGGGGCTGAAAGCAACATGTTATCCGTCGTATATG
GAGGAGCTATCATCTTATACCATTGCTGTTGAGTCAAGAGTCCAAAAGGATGGGAAAGTT
GTGACAAGTCGAGGACCAGGAACTGCGATTGAGTATGCTGTTGCATTGGTTGAGCAGTTG
TATGGAAAAGAGAAGGCTGATGAAGTTTCTGGCCCACTGGTGATGCGCCCAAATCATAGC
GAAGAATTTGCATTTGCTGAGCTTAATTCAGTAAATTGGACATTTACGAGTAAGCCACAG
ATTCTTGTACCTATTGCGAATGGTTCCGAGGAAATTGAAGCAGCTACTATTATTGATGTA
CTTCGACGAGCAAATGCTCAAGTAGTAGTGGCATCTTTGGAAGACACATTGGAAATTTTC
GCTTCCAGAAAAGTTAAGCTTGTAGCAGATGTGCTCCTTGATGAAGCTGCTAAGCAGTCA
TACGATCTTATCGTCCTGCCAGGTGGTCTTGGTGGTGCCCAAGCATTTGCCAACTCAGAA
AAGTTGGTTGACATGCTGAAGAAGCAGAGAGAATCAAGCAAACCATATGGAGCAATGTGT
GCATCTCCGGCTCTAGTCCTAGAGCACCATGGGTTGCTCAAGGGTAAGAAGGCTACTGCC
TTTCCAGCTATGTGCAATAAGCTCTCAGATCCAAGCGAAGCAGAAAATAGGGTGTTGATT
GATGGCAATCTCGTTACTAGCAGAGGACCAGGAACTACCATGGAGTTTGCACTGGCCATT
GCAGATAAGTTTATTGGCCGCAAGGAAGTACTAGAGCTAGCAAAGAAGATGGTTTTCTAA

Peptide Sequence

PEP ID

XP_016472563.1
PEP Infomation

PREDICTED: protein DJ-1 homolog B-like [Nicotiana tabacum]
Sequence

MAAPVMRHLTPVPSSFIKLQILPQSRSFFTLSTPRKKKRFSLVTSFSVMASATKKVLVPI
ANGTEPIEAIVPIDILRRAGAEVTVASVEKQLQIEGVHGIKIVADALISDCADTEFDLIS
LPGGIPGATNLRNCKTLESIVKKQAVNGRFYAAICAAPAVALGSWGLLKGLKATCYPSYM
EELSSYTIAVESRVQKDGKVVTSRGPGTAIEYAVALVEQLYGKEKADEVSGPLVMRPNHS
EEFAFAELNSVNWTFTSKPQILVPIANGSEEIEAATIIDVLRRANAQVVVASLEDTLEIF
ASRKVKLVADVLLDEAAKQSYDLIVLPGGLGGAQAFANSEKLVDMLKKQRESSKPYGAMC
ASPALVLEHHGLLKGKKATAFPAMCNKLSDPSEAENRVLIDGNLVTSRGPGTTMEFALAI
ADKFIGRKEVLELAKKMVF

Transcript Sequence

Gene sequence data has not been registered.